All Issue

2020 Vol.38, Issue 6 Preview Page

Research Article

31 December 2020. pp. 795-809
Abstract
References
1
Bartling D, Weiler EW (1992) Leucine aminopeptidase from arabidopsis thaliana molecular evidence for a phylogenetically conserved enzyme of protein turnover in higher plants. Eur J Biochem 205:425-431. doi:10.1111/j.1432-1033.1992.tb16796.x 10.1111/j.1432-1033.1992.tb16796.x1555602
2
Boyer J, Liu RH (2004) Apple phytochemicals and their health benefits. Nutr J 3:1-15. doi:10.1186/1475-2891-3-5 10.1186/1475-2891-3-515140261PMC442131
3
Bradford MM (1976) A rapid sensitive methods for the quantization of microgram quantities of protein utilizing the principles of protein-dye binding. Anal Biochem 72:248-255. doi:10.1016/0003-2697(76)90527-3 10.1016/0003-2697(76)90527-3
4
Brehler R, Theissen U, Mohr C, Luger T (1997) 'Latex-fruit syndrome': frequency of cross-reacting IgE antibodies. Allergy 52:404-10. doi:10.1111/j.1398-9995.1997.tb01019.x 10.1111/j.1398-9995.1997.tb01019.x9188921
5
Doherty GJ, McMahon HT (2008) Mediation, modulation, and consequences of membrane-cytoskeleton interactions. Annu Rev Biophys 37:65-95. doi:10.1146/annurev.biophys.37.032807.125912 10.1146/annurev.biophys.37.032807.12591218573073
6
Eastmond PJ (2007) MONODEHYROASCORBATE REDUCTASE4 is required for seed storage oil hydrolysis and postgerminative growth in Arabidopsis. Plant Cell 19:1376-1387. doi:10.1105/tpc.106.043992 10.1105/tpc.106.04399217449810PMC1913749
7
Eldakak M, Milad SIM, Nawar AI, Rohila JS (2013) Proteomics: a biotechnology tool for crop improvement. Front Plant Sci 4:1-12. doi:10.3389/fpls.2013.00035 10.3389/fpls.2013.0003523450788PMC3584254
8
Esteve C, D'Amato A, Marina ML, García MC, Righett PG (2013) In-depth proteomic analysis of banana (Musa spp.) fruit with combinatorial peptide ligand libraries. Electrophoresis 34:207-214. doi:10.1002/elps.201200389 10.1002/elps.20120038923161558
9
Fukamatsu Y, Yabe N, Hasunuma K (2003) Arabidopsis NDK1 is a component of ROS signaling by interacting with three catalases. Plant Cell Physiol 44:982-989. doi:10.1093/pcp/pcg140 10.1093/pcp/pcg14014581623
10
Gill SS, Anjum NA, Hasanuzzaman M, Gill R, Trivedi DK, Ahmad I, Pereira E, Tuteja N (2013) Glutathione and glutathione reductase: a boon in disguise for plant abiotic stress defense operations. Plant Physiol Biochem 70:204-12. doi:10.1016/j.plaphy.2013.05.032 10.1016/j.plaphy.2013.05.03223792825
11
Gowri G, Bugos RC, Campbell WH, Maxwell CA, Dixon RA (1991) Stress responses in alfalfa (Medicago sativa L) X Molecular cloning and expression of S-adenosyl-L-methionine: caffeic acid 3-O-methyltransferase, a key enzyme of lignin biosynthesis. Plant Physiol 97:7-14. doi:10.1104/pp.97.1.7 10.1104/pp.97.1.716668418PMC1080956
12
Guarino C, Arena S, De Simone L, D'Ambrosio C, Santoro S, Rocco M, Scaloni A, Marra M (2007) Proteomic analysis of the major soluble components in Annurca apple flesh. Mol Nutr Food Res 51:255-262. doi:10.1002/mnfr.200600133 10.1002/mnfr.20060013317266180
13
Han SE, Seo YS, Kim D, Sung SK, Kim WT (2007) concomitantly induced during ripening and implicates MdCASs in the possible role of the cyanide detoxification in Fuji apple (Malus domestica Borkh) fruits. Plant Cell Rep 26:1321-1331. doi:10.1007/s00299-007-0316-9 10.1007/s00299-007-0316-917333023
14
Hartl FU, Hayer-Hartl M (2009) Converging concepts of protein folding in vitro and in vivo. Nat Struc Mol Biol 16:574-581. doi:10.1038/nsmb.1591 10.1038/nsmb.159119491934
15
Herndl A, Marzban G, Hahn R, Boscia D, Hemmer W, Maghuly F, Stoyanova E, Katinger, Laimer M (2007) Mapping of Malus domestica allergens by 2-D electrophoresis and IgE-reacivity. Electrophoresis 28:437-438. doi:10.1002/elps.200600342 10.1002/elps.20060034217195260
16
Hoepflinger MC, Reitsamer J, Geretschlaeger AM, Mehlmer N, Tenhaken R (2013) The effect of translationally controlled tumour protein (TCTP) on programmed cell death in plants. BMC Plant Biol 13:135-135. doi:10.1186/1471-2229-13-135 10.1186/1471-2229-13-13524040826PMC3847524
17
Hourton-Cabassa C, Ambard-Bretteville F, Moreau F, Davy de Virville J, Remy R, Colas des Francs-Small C (1998) Stress induction of mitochondrial formate dehydrogenase in potato leaves. Plant Physiol 116:627-635. doi:10.1104/pp.116.2.627 10.1104/pp.116.2.6279490763PMC35120
18
Hurkman WJ, Tanaka CK (1986) Solubilization of plant membrane proteins for analysis by two-dimensional gel glectrophoresis. Plant Physiol 81:802-806. doi:10.1104/pp.81.3.802 10.1104/pp.81.3.80216664906PMC1075430
19
Ito H, Iwabuchi M, Ogawa K (2003) The sugar-metabolic enzymes aldolase and triose-phosphate isomerase are targets of glutathionylation in Arabidopsis thaliana: detection using biotinylated glutathione. Plant Cell Physiol 44:655-660. doi:10.1093/pcp/pcg098 10.1093/pcp/pcg09812881492
20
Izumi M, Tsunoda H, Suzuki Y, Makino A, Ishida H (2012) RBCS1A and RBCS3B, two major members within the Arabidopsis RBCS multigene family, function to yield sufficient Rubisco content for leaf photosynthetic capacity. J Exp Bot 63:2159-2170. doi:10.1093/jxb/err434 10.1093/jxb/err43422223809PMC3295403
21
Janick J, Cummins JV, Brown SK, Hemmat M (1996) Apples. In J Janick, JN Moore, eds, Fruit breeding, vol 1. Tree and tropical fruits. Wiley, New York, USA, pp 1-66
22
Jin H, Song Z, Nikolau BJ (2012) Reverse genetic characterization of two paralogous acetoacetyl CoA thiolase genes in Arabidopsis reveals their importance in plant growth and development. Plant J 70:1015-1032. doi:10.1111/j.1365-313X.2012.04942.x 10.1111/j.1365-313X.2012.04942.x22332816
23
Junge W, Nelson N (2015) ATP synthase. Annu Rev Biochem 84:631-57. doi:10.1146/annurev-biochem-060614-034124 10.1146/annurev-biochem-060614-03412425839341
24
Kajikawa M, Hirai N, Hashimoto T (2009) A PIP-family protein is required for biosynthesis of tobacco alkaloids. Plant Mol Biol 69:287-298. doi:10.1007/s11103-008-9424-3 10.1007/s11103-008-9424-319002761
25
Kato M, Nagasaki-Takeuchi N, Ide Y, Tomioka R, Maeshima M (2010) PCaPs, possible regulators of PtdInsP signals on plasma membrane. Plant Signal Behav 5:848-850. doi:10.4161/psb.5.7.11825 10.4161/psb.5.7.1182520448467PMC3014536
26
Kopylov M, Bass HW, Stroupe ME (2015) The maize (Zea mays L.) nucleoside diphosphate kinase1 (ZmNDPK1) gene encodes a human NM23-H2 homologue that binds and stabilizes G-quadruplex DNA. Biochemistry 54:1743-1757. doi:10.1021/bi501284g 10.1021/bi501284g25679041
27
Kwak KJ, Kim YO, Kang H (2005) Characterization of transgenic Arabidopsis plants overexpressing GR-RBP4 under high salinity, dehydration, or cold stress. J Exp Bot 56:3007-3016. doi:10.1093/jxb/eri298 10.1093/jxb/eri29816207746
28
Kwon K, Choi D, Hyun JK, Jung HS, Baek K, Park C (2013) Novel glyoxalases from Arabidopsis thaliana. FEBS J 280:3328-3339. doi:10.1111/febs.12321 10.1111/febs.1232123651081
29
Kwon YS, Lee DY, Rakwal R, Baek SB, Lee JH, Kwak YS, Seo JS, Chung WS, Bae DW, et al. (2016) Proteomic analyses of the interaction between the plant-growth promoting rhizobacterium Paenibacillus polymyxa E681 and Arabidopsis thaliana. Proteom 16:122-135. doi:10.1002/pmic.201500196 10.1002/pmic.20150019626460066
30
Lamkemeyer P, Laxa M, Collin V, Li W, Finkemeier I, Schoettler MA, Holtkamp V, Tognetti VB, Issakidis-Bourguet E, et al. (2006) Peroxiredoxin Q of Arabidopsis thaliana is attached to the thylakoids and functions in context of photosynthesis. Plant J 45:968-981. doi:10.1111/j.1365-313X.2006.02665.x 10.1111/j.1365-313X.2006.02665.x16507087
31
Latijnhouwers M, Xu XM, Moeller SG (2010) Arabidopsis stromal 70-kDa heat shock proteins are essential for chloroplast development. Planta 232:567-578. doi:10.1007/s00425-010-1192-z 10.1007/s00425-010-1192-z20506024
32
Lee JJ, Park KW, Kwak YS, Ahn JY, Jung YH, Lee BH, Jeng JC, Lee HS, Kwak SS (2012) Comparative proteomic study between tuberous roots of light orange- and purple-fleshed sweetpotato cultivars. Plant Sci 193-194:120-129. doi:10.1016/j.plantsci.2012.06.003 10.1016/j.plantsci.2012.06.00322794925
33
Lee TA, Bailey-Serres J (2019) Integrative analysis from the epigenome to translatome uncovers patterns of dominant nuclear regulation during transient stress. Plant Cell 31:2573-2595. doi:10.1105/tpc.19.00463 10.1105/tpc.19.0046331519798PMC6881120
34
Li R, Qiu Z, Wang X, Gong P, Xu Q, Yu QB, Guan Y (2019) Pooled CRISPR/Cas9 reveals redundant roles of plastidial phosphoglycerate kinases in carbon fixation and metabolism. Plant J 98:1078-1089. doi:10.1111/tpj.14303 10.1111/tpj.1430330834637
35
Marondedze C, Thomas LA (2012) Apple hypanthium firmness: New insights from comparative proteomics. Appl Biochem Biotechnol 168:306-326. doi:10.1007/s12010-012-9774-9 10.1007/s12010-012-9774-922733236
36
Maruta T, Ichikawa Y, Mieda T, Takeda T, Tamoi M, Yabuta Y, Ishikawa T, Shigeoka S (2010) The contribution of Arabidopsis homologs of L-gulono-1,4-lactone oxidase to the biosynthesis of ascorbic acid. Biosci Biotechnol Biochem 74:1494-1497. doi:10.1271/bbb.100157 10.1271/bbb.10015720622436
37
Maruta T, Noshi M, Tanouchi A, Tamoi M, Yabuta Y, Yoshimura K, Ishikawa T, Shigeoka S (2012) H2O2-triggered retrograde signaling from chloroplasts to nucleus plays specific role in response to stress. J Biol Chem 287:11717-11729. doi:10.1074/jbc.M111.292847 10.1074/jbc.M111.29284722334687PMC3320920
38
Marzban G, Puehringer H, Dey R, Brynda S, Ma Y, Martinelli A, Zaccarini M, van der Weg E, Housley Z, et al. (2005) Localisation and distribution of the major allergens in apple fruits. Plant Sci 169:387-394 10.1016/j.plantsci.2005.03.027
39
Matsui NM, Smith-Beckerman DM, Epstein LB (1999) Staining of preparative 2-D gels. In AJ Link, ed, 2-D Proteome Analysis Protocols. Humana Press, Totowa, NJ, USA, pp 301-311. doi:10.1016/j.plantsci.2005.03.027 10.1016/j.plantsci.2005.03.027
40
Meng M, Geisler M, Johansson H, Harholt J, Scheller HV, Mellerowicz EJ, Kleczkowski LA (2009) UDP-glucose pyrophosphorylase is not rate limiting, but is essential in Arabidopsis. Plant Cell Physiol 50:998-1011. doi:10.1093/pcp/pcp052 10.1093/pcp/pcp05219366709
41
Nagase T, Seki N, Tanaka A, Ishikawa K, Nomura N (1996) Prediction of the coding sequences of unidentified human genes IV the coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1. DNA Res 2:167-174. doi:10.1093/dnares/2.4.167 10.1093/dnares/2.4.1678590280
42
Ngoc LD, Brillard M, Hoebeke J (1993) The alpha- and beta-subunits of the jacalins are cleavage products from a 17-kDa precursor. Biochim Biophys Acta 1156:219-222. doi:10.1016/0304-4165(93)90139-Y 10.1016/0304-4165(93)90139-Y
43
Nikolovski N, Rubtsov D, Segura MP, Miles GP, Stevens TJ, Dunkley TP, Munro S, Lilley KS, Dupree P (2012) Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Plant Physiol 160:1037-1051. doi:10.1104/pp.112.204263 10.1104/pp.112.20426322923678PMC3461528
44
Paiva NL, Edwards R, Sun Y, Hrazdina G, Dixon RA (1991) Stress responses in alfalfa (Medicago sativa L.) 11 Molecular cloning and expression of alfalfa isoflavone reductase, a key enzyme of isoflavonoid phytoalexin biosynthesis. Plant Mol Biol 17:653-667. doi:10.1007/BF00037051 10.1007/BF000370511912490
45
Patron NJ, Rogers MB, Keeling PJ (2004) Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates. Eukaryot Cell 3:1169-75. doi:10.1128/EC.3.5.1169-1175.2004 10.1128/EC.3.5.1169-1175.200415470245PMC522617
46
Peng Y, Lu R (2007) Prediction of apple fruit firmness and soluble solids content using characteristics of multispectral scattering images. J Food Eng 82:142-152. doi:10.1016/j.jfoodeng.2006.12.027 10.1016/j.jfoodeng.2006.12.027
47
Prabhakar V, Lottgert T, Gigolashvili T, Bell K, Flugge UI, Hausler RE (2009) Molecular and functional characterization of the plastid-localized Phosphoenolpyruvate enolase (ENO1) from Arabidopsis thaliana. FEBS Lett 583:983-991. doi:10.1016/j.febslet.2009.02.017 10.1016/j.febslet.2009.02.01719223001
48
Qin G, Wang Q, Liu J, Li B, Tian S (2009) Proteomic analysis of changes in mitochondrial protein expression during fruit senescence. Proteomics 9:4241-53. doi:10.1002/pmic.200900133 10.1002/pmic.20090013319688753
49
Sancho AI, Foxall R, Rigby NM, Browne T, Zuidmeer L, van Ree R, Waldron KW, Mills EN (2006a) Maturity and storage influence on the apple (Malus domestica) allergen Mal d 3, a nonspecific lipid transfer protein. J Agric Food Chem 54, 5098-5104. doi:10.1021/jf0530446 10.1021/jf053044616819922
50
Sancho AI, Foxall R, Browne T, Dey R, Zuidmeer L, Marzban G, Waldron, K.W, van Ree R, et al. (2006b) Effect of postharvest storage on the expression of the apple allergen Mal d 1. J Agric Food Chem 54:5917-5923. doi:10.1021/jf060880m 10.1021/jf060880m16881695
51
Schiefner A, Sinz Q, Neumaier I, Schwab W, Skerra A (2013) Structural basis for the enzymatic formation of the key strawberry flavor compound 4-hydroxy-2,5-dimethyl-3(2H)-furanone. J Biol Chem 288:16815-16826. doi:10.1074/jbc.M113.453852 10.1074/jbc.M113.45385223589283PMC3675614
52
Scranton MA, Yee A, Park SY, Walling LL (2012) Plant leucine aminopeptidases moonlight as molecular chaperones to alleviate stress-induced damage. J Biol Chem 287:18408-18417. doi:10.1074/jbc.M111.309500 10.1074/jbc.M111.30950022493451PMC3365729
53
Selinski J, Koenig N, Wellmeyer B, Hanke GT, Linke V, Neuhaus HE, Scheibe R (2014) The plastid-localized NAD-dependent malate dehydrogenase is crucial for energy homeostasis in developing Arabidopsis thaliana seeds. Mol Plant 7:170-186. doi:10.1093/mp/sst151 10.1093/mp/sst15124198233
54
Shin MH, Munner S, Kim YH, Lee JJ, Bae DW, Kwack YB, Kumarihami HMPC, Kim JG (2020) Proteomic analysis reveals dynamic regulation of fruit ripening in response to exogenous ethylene in kiwifruit cultivars. Hortic Environ Biotechnol 61:93-114. doi:10.1007/s13580-019-00209-6 10.1007/s13580-019-00209-6
55
Sukrong S, Yun KY, Stadler P, Kumar C, Facciuolo T, Moffatt BA, Falcone DL (2012) Improved growth and stress tolerance in the Arabidopsis oxt1 mutant triggered by altered adenine metabolism. Mol Plant 5:1310-1332. doi:10.1093/mp/sss065 10.1093/mp/sss06522859732
56
Suzuki K, Nakanishi H, Bower J, Yoder DW, Osteryoung KW, Miyagishima SY (2009) Plastidchaperoninproteins Cpn60 alpha and Cpn60 beta are required for plastid division in Arabidopsis thaliana. BMC Plant Biol 9:38-38. doi:10.1186/1471-2229-9-38 10.1186/1471-2229-9-3819344532PMC2670834
57
Tabuchi M, Sugiyama K, Ishiyama K, Inoue E, Sato T, Takahashi H, Yamaya T (2005) Severe reduction in growth rate and grain filling of rice mutants lacking OsGS1;1, a cytosolic glutamine synthetase1;1. Plant J 42:641-651. doi:10.1111/j.1365-313X.2005.02406.x 10.1111/j.1365-313X.2005.02406.x15918879
58
Teixeira PF, Glaser E (2013) Processing peptidases in mitochondria and chloroplasts. Biochim Biophys Acta 1833:360-70. doi:10.1016/j.bbamcr.2012.03.012 10.1016/j.bbamcr.2012.03.01222495024
59
Thornalley PJ, Langborg A, Minhas HS (1999) Formation of glyoxal, methylglyoxal and 3-deoxyglucosone in the glycation of proteins by glucose. Biochem J 344:109-116. doi:10.1042/bj3440109 10.1042/bj3440109PMC1220620
60
van't Veer P, Jansen MC, Klerk M, Kok FJ (2000) Fruits and vegetables in the prevention of cancer and cardiovascular disease. Public Health Nutr 3:103-107. doi:10.1017/S1368980000000136 10.1017/S136898000000013610786730
61
Walker JE, Runswick MJ, Neuhaus D, Montgomery MG, Carbajo RJ, Kellas FA (2005) Structure of the F1-binding domain of the stator of bovine F1Fo-ATPase and how it binds an alpha-subunit. J Mol Biol 351:824-838. doi:10.1016/j.jmb.2005.06.012 10.1016/j.jmb.2005.06.01216045926
62
Wheeler MC, Tronconi MA, Drincovich MF, Andreo CS, Fluegge UI, Maurino VG (2005) A comprehensive analysis of the NADP-malic enzyme gene family of Arabidopsis. Plant Physiol 139:39-51. doi:10.1104/pp.105.065953 10.1104/pp.105.06595316113210PMC1203356
63
Yahalom A, Kim TH, Roy B, Singer R, von Arnim AG, Chamovitz DA (2008) Arabidopsis eIF3e is regulated by the COP9 signalosome and has an impact on development and protein translation. Plant J 53:300-311. doi:10.1111/j.1365-313X.2007.03347.x 10.1111/j.1365-313X.2007.03347.x18067529
64
Yamauchi Y, Hasegawa A, Taninaka A, Mizutani M, Sugimoto Y (2011) NADPH-dependent reductases involved in the detoxification of reactive carbonyls in plants. J Biol Chem 286:6999-7009. doi:10.1074/jbc.M110.202226 10.1074/jbc.M110.20222621169366PMC3044956
65
Yang H, Zhang T, Masuda T, Lv C, Sun L, Qu G, Zhao G (2011) Chitinase III in pomegranate seeds (Punica granatum Linn): a high-capacity calcium-binding protein in amyloplasts. Plant J 68:765-776. doi:10.1111/j.1365-313X.2011.04727.x 10.1111/j.1365-313X.2011.04727.x21790816
66
Zhao Z, Assmann SM (2011) The glycolytic enzyme, phosphoglycerate mutase, has critical roles in stomatal movement, vegetative growth, and pollen production in Arabidopsis thaliana. J Exp Bot 62:5179-5189 93:276-94. doi:10.1093/jxb/err223 10.1093/jxb/err22321813794PMC3193020
67
Zheng Q, Song J, Campbell-Palmer L, Thompson K, Li L, Walker B, Cui Y, Li X (2013) A proteomic investigation of apple fruit during ripening and in response to ethylene treatment. J Proteom 93:276-294. doi:10.1016/j.jprot.2013.02.006 10.1016/j.jprot.2013.02.00623435059
68
Zhi T, Zhou Z, Huang Y, Han C, Liu Y, Zhu Q, Ren C (2016) Sugar suppresses cell death caused by disruption of fumarylacetoacetate hydrolase in Arabidopsis. Planta 244:557-571. doi:10.1007/s00425-016-2530-6 10.1007/s00425-016-2530-627097641
Information
  • Publisher :KOREAN SOCIETY FOR HORTICULTURAL SCIENCE
  • Publisher(Ko) :원예과학기술지
  • Journal Title :Horticultural Science and Technology
  • Journal Title(Ko) :원예과학기술지
  • Volume : 38
  • No :6
  • Pages :795-809
  • Received Date : 2020-05-27
  • Revised Date : 2020-07-03
  • Accepted Date : 2020-08-21